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Transcript: MGP_C57BL6NJ_T0035528.1

Description

hypoxia inducible factor 1, alpha subunit [Source:MGI Symbol;Acc:MGI:106918]

Gene Synonyms

AA959795, HIF-1-alpha, HIF-1alpha, HIF1-alpha, HIF1alpha, MOP1, bHLHe78

Location

Chromosome 12: 76,126,794-76,151,966 forward strand.

Reference strain equivalent

Hif1a

About this transcript

This transcript has 6 exons, is annotated with 19 domains and features and maps to 107 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0020230.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0035529.1-4339836aaMGP_C57BL6NJ_P0035529
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0035528.1-1759258aaMGP_C57BL6NJ_P0035528
 
Protein coding
CCDS25977A0A0R4J1E9 A0A0R4J1F0 Q61221
-
MGP_C57BL6NJ_T0035531.1-484No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0035530.1-693No protein-
 
Retained intron
--

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,759 bps, Translation length: 258 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61221

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS25977

Version

MGP_C57BL6NJ_T0035528.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.