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Transcript: MGP_C57BL6NJ_T0032955.1

Description

vacuolar protein sorting 25 [Source:MGI Symbol;Acc:MGI:106354]

Gene Synonyms

1110020N13Rik, AW107467, D11Wsu68e

Location

Chromosome 11: 107,325,320-107,338,135 forward strand.

Reference strain equivalent

Vps25

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features and maps to 241 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0019580.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0032959.1-876184aaMGP_C57BL6NJ_P0032959
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0032957.1-1220172aaMGP_C57BL6NJ_P0032957
 
Protein coding
--
MGP_C57BL6NJ_T0032955.1-1106176aaMGP_C57BL6NJ_P0032955
 
Protein coding
CCDS25458, CCDS70311, CCDS70312, CCDS70313A2A4J8 A2A4K0 A8XY17
E9PXS9 Q9CQ80 		-
MGP_C57BL6NJ_T0032960.1-790128aaMGP_C57BL6NJ_P0032960
 
Protein coding
--
MGP_C57BL6NJ_T0032956.1-615148aaMGP_C57BL6NJ_P0032956
 
Protein coding
--
MGP_C57BL6NJ_T0032958.1-36191aaMGP_C57BL6NJ_P0032958
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0032961.1-844No protein-
 
Retained intron
--

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,106 bps, Translation length: 176 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9CQ80

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS25458, CCDS70311, CCDS70312, CCDS70313

Version

MGP_C57BL6NJ_T0032955.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.