Transcript: MGP_C57BL6NJ_T0031656.1

Description

ligase III, DNA, ATP-dependent [Source:MGI Symbol;Acc:MGI:109152]

Gene Synonyms

D11Wsu78e

Location

Chromosome 11: 86,579,481-86,601,235 forward strand.

Reference strain equivalent

Lig3

About this transcript

This transcript has 20 exons, is annotated with 43 domains and features and maps to 437 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0019222.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0031657.1	-	5941	1012aa	MGP_C57BL6NJ_P0031657	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0031664.1	-	5793	1012aa	MGP_C57BL6NJ_P0031664	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0031656.1	-	4560	1012aa	MGP_C57BL6NJ_P0031656	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS25147, CCDS70266	B1AT03 G3UYI8 K4DI59 Q3TJN5 Q3UC82 Q80ZH7	-
MGP_C57BL6NJ_T0031661.1	-	3636	1011aa	MGP_C57BL6NJ_P0031661	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0031660.1	-	3631	1011aa	MGP_C57BL6NJ_P0031660	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0031659.1	-	3056	953aa	MGP_C57BL6NJ_P0031659	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0031662.1	-	1785	431aa	MGP_C57BL6NJ_P0031662	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0031663.1	-	1782	431aa	MGP_C57BL6NJ_P0031663	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0031667.1	-	789	174aa	MGP_C57BL6NJ_P0031667	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0031658.1	-	2901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0031665.1	-	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0031666.1	-	599	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,560 bps, Translation length: 1,012 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS25147, CCDS70266

Version

MGP_C57BL6NJ_T0031656.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0031656.1

Summary

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Transcript: MGP_C57BL6NJ_T0031656.1

Summary

About Us

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