Transcript: MGP_C57BL6NJ_T0028838.1

Description

spectrin beta, non-erythrocytic 1 [Source:MGI Symbol;Acc:MGI:98388]

Gene Synonyms

9930031C03Rik, AL033301, Elf, SPTB2, Spnb-2, Spnb2, Sptb2, beta fodrin, brain spectrin, elf1, elf3, mKIAA4049, non-erythrocytic, spectrin G

Location

Chromosome 11: 29,102,755-29,278,016 reverse strand.

Reference strain equivalent

Sptbn1

About this transcript

This transcript has 36 exons, is annotated with 115 domains and features and maps to 436 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0018506.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0028838.1	-	8461	2363aa	MGP_C57BL6NJ_P0028838	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24506, CCDS36123	A0A0A0MQG2 Q62261	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0028842.1	-	9107	2154aa	MGP_C57BL6NJ_P0028842	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0028840.1	-	8238	2363aa	MGP_C57BL6NJ_P0028840	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0028844.1	-	6524	2092aa	MGP_C57BL6NJ_P0028844	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0028845.1	-	3342	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0028841.1	-	3084	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0028839.1	-	2956	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0028843.1	-	744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 36, Coding exons: 35, Transcript length: 8,461 bps, Translation length: 2,363 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62261

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS24506, CCDS36123

Version

MGP_C57BL6NJ_T0028838.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0028838.1

Summary

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Transcript: MGP_C57BL6NJ_T0028838.1

Summary

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