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Transcript: MGP_C57BL6NJ_T0025763.1

Description

cadherin 23 (otocadherin) [Source:MGI Symbol;Acc:MGI:1890219]

Gene Synonyms

4930542A03Rik, USH1D, ahl, ahl1, bob, bus, mdfw, nmf112, nmf181, nmf252, sals, v

Location

Chromosome 10: 61,662,415-62,049,149 reverse strand.

Reference strain equivalent

Cdh23

About this transcript

This transcript has 68 exons, is annotated with 182 domains and features and maps to 605 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0017664.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0025766.1-110963354aaMGP_C57BL6NJ_P0025766
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0025767.1-110903352aaMGP_C57BL6NJ_P0025767
 
Protein coding
--
MGP_C57BL6NJ_T0025765.1-109913319aaMGP_C57BL6NJ_P0025765
 
Protein coding
--
MGP_C57BL6NJ_T0025763.1-106883353aaMGP_C57BL6NJ_P0025763
 
Protein coding
CCDS56704E9Q7M6 F8WIF5 K4DI74
Q99PF4 		-
MGP_C57BL6NJ_T0025764.1-105923321aaMGP_C57BL6NJ_P0025764
 
Protein coding
--
MGP_C57BL6NJ_T0025769.1-3787No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0025768.1-3682No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0025784.1-3041No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0025780.1-1510No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0025783.1-1052No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0025781.1-650No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0025785.1-438No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0025770.1-10435No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0025771.1-10295No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0025779.1-2574No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0025772.1-1064No protein-
 
Retained intron
--

Summary

Statistics

Exons: 68, Coding exons: 67, Transcript length: 10,688 bps, Translation length: 3,353 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99PF4

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS56704

Version

MGP_C57BL6NJ_T0025763.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.