Transcript: MGP_C57BL6NJ_T0024049.1

Description

immunoglobulin superfamily, member 9 [Source:MGI Symbol;Acc:MGI:2135283]

Gene Synonyms

644ETD8, Dasm1, Igsf9a, Kiaa1355-hp, NRT1, Ncaml, Nrt1, mKIAA1355

Location

Chromosome 1: 184,277,152-184,284,953 forward strand.

Reference strain equivalent

Igsf9

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features and maps to 101 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0017191.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0024056.1	-	4205	1179aa	MGP_C57BL6NJ_P0024056	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0024052.1	-	4133	1179aa	MGP_C57BL6NJ_P0024052	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0024050.1	-	775	168aa	MGP_C57BL6NJ_P0024050	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0024058.1	-	636	211aa	MGP_C57BL6NJ_P0024058	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0024049.1	-	617	109aa	MGP_C57BL6NJ_P0024049	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15515	A0A0A6YXP1 D3YZD2 D3Z7T6 Q05BQ1	-
MGP_C57BL6NJ_T0024055.1	-	3964	528aa	MGP_C57BL6NJ_P0024055	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0024051.1	-	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0024054.1	-	2029	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024061.1	-	926	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024059.1	-	921	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024060.1	-	796	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024057.1	-	786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024053.1	-	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024062.1	-	590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 617 bps, Translation length: 109 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q05BQ1

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS15515

Version

MGP_C57BL6NJ_T0024049.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0024049.1

Summary

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Transcript: MGP_C57BL6NJ_T0024049.1

Summary

About Us

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