Transcript: MGP_C57BL6NJ_T0023995.1

Description

coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]

Gene Synonyms

AU040324, xenin

Location

Chromosome 1: 183,837,405-183,880,306 forward strand.

Reference strain equivalent

Copa

About this transcript

This transcript has 33 exons, is annotated with 40 domains and features and maps to 575 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0017179.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0023999.1	-	4351	1233aa	MGP_C57BL6NJ_P0023999	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0023995.1	-	4622	1224aa	MGP_C57BL6NJ_P0023995	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35780	D6RH55 F6XJN3 F8WHL2 Q8CIE6	-
MGP_C57BL6NJ_T0023997.1	-	1627	78aa	MGP_C57BL6NJ_P0023997	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0024001.1	-	657	142aa	MGP_C57BL6NJ_P0024001	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0024000.1	-	457	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0023996.1	-	2973	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024003.1	-	2578	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0023998.1	-	2534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024002.1	-	2505	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0024004.1	-	520	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 33, Coding exons: 33, Transcript length: 4,622 bps, Translation length: 1,224 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CIE6

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS35780

Version

MGP_C57BL6NJ_T0023995.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0023995.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_C57BL6NJ_T0023995.1

Summary

About Us

Get help

Our sister sites

Follow us