Transcript: MGP_C57BL6NJ_T0023907.1

Description

death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]

Gene Synonyms

CASP8IP1, DEFT, Dedpro1, FLDED1, KE05

Location

Chromosome 1: 183,011,932-183,027,968 forward strand.

Reference strain equivalent

Dedd

About this transcript

This transcript has 6 exons, is annotated with 15 domains and features and maps to 239 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0017157.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0023907.1	-	2563	318aa	MGP_C57BL6NJ_P0023907	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15490	D3YZI2 D3Z0F7 D3Z0I1 D3Z4Q1 Q3U001 Q9Z1L3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0023908.1	-	2322	318aa	MGP_C57BL6NJ_P0023908	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023909.1	-	1618	318aa	MGP_C57BL6NJ_P0023909	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023914.1	-	1606	318aa	MGP_C57BL6NJ_P0023914	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023911.1	-	849	234aa	MGP_C57BL6NJ_P0023911	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023916.1	-	815	155aa	MGP_C57BL6NJ_P0023916	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023910.1	-	757	178aa	MGP_C57BL6NJ_P0023910	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023913.1	-	374	8aa	MGP_C57BL6NJ_P0023913	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023912.1	-	225	31aa	MGP_C57BL6NJ_P0023912	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023915.1	-	3160	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 2,563 bps, Translation length: 318 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Z1L3

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS15490

Version

MGP_C57BL6NJ_T0023907.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0023907.1

Summary

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Transcript: MGP_C57BL6NJ_T0023907.1

Summary

About Us

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