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Transcript: MGP_C57BL6NJ_T0023236.1

Description

torsin A interacting protein 1 [Source:MGI Symbol;Acc:MGI:3582693]

Gene Synonyms

LAP1, Lap1B

Location

Chromosome 1: 166,491,209-166,529,672 reverse strand.

Reference strain equivalent

Tor1aip1

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features and maps to 235 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0017021.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0023237.1-4234576aaMGP_C57BL6NJ_P0023237
 
Protein coding
-Ensembl Canonical
MGP_C57BL6NJ_T0023236.1-3716391aaMGP_C57BL6NJ_P0023236
 
Protein coding
CCDS15387, CCDS48401, CCDS48402D3YXF8 D3YZJ9 D3YZP0
E9PWW2 J3QQ40 Q3UE61
Q921T2 		-
MGP_C57BL6NJ_T0023239.1-1952520aaMGP_C57BL6NJ_P0023239
 
Protein coding
--
MGP_C57BL6NJ_T0023241.1-806176aaMGP_C57BL6NJ_P0023241
 
Protein coding
--
MGP_C57BL6NJ_T0023240.1-620190aaMGP_C57BL6NJ_P0023240
 
Protein coding
--
MGP_C57BL6NJ_T0023238.1-2723291aaMGP_C57BL6NJ_P0023238
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0023242.1-1600324aaMGP_C57BL6NJ_P0023242
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0023244.1-561101aaMGP_C57BL6NJ_P0023244
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0023245.1-784No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0023243.1-658No protein-
 
Retained intron
--

Summary

Statistics

Exons: 12, Coding exons: 8, Transcript length: 3,716 bps, Translation length: 391 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q921T2

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS15387, CCDS48401, CCDS48402

Version

MGP_C57BL6NJ_T0023236.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.