Transcript: MGP_C57BL6NJ_T0021748.1

Description

selenocysteine lyase [Source:MGI Symbol;Acc:MGI:1355310]

Gene Synonyms

9830169H08, A930015N15Rik, SCL, Scly1, Scly2, Selenocysteine reductase

Location

Chromosome 1: 96,398,100-96,423,847 forward strand.

Reference strain equivalent

Scly

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features and maps to 202 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0016700.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0021748.1	-	2202	432aa	MGP_C57BL6NJ_P0021748	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS15159	A0A0R4J069 D3Z3I6 D3Z7G6 F6ZFP8 F7BB44 F7D651 M0QWF1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0021750.1	-	763	245aa	MGP_C57BL6NJ_P0021750	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0021754.1	-	747	249aa	MGP_C57BL6NJ_P0021754	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0021757.1	-	655	218aa	MGP_C57BL6NJ_P0021757	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0021753.1	-	648	215aa	MGP_C57BL6NJ_P0021753	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0021756.1	-	304	68aa	MGP_C57BL6NJ_P0021756	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0021751.1	-	819	61aa	MGP_C57BL6NJ_P0021751	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0021755.1	-	451	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_C57BL6NJ_T0021752.1	-	2301	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C57BL6NJ_T0021749.1	-	945	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,202 bps, Translation length: 432 residues

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS15159

Version

MGP_C57BL6NJ_T0021748.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C57BL6NJ_T0021748.1

Summary

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Transcript: MGP_C57BL6NJ_T0021748.1

Summary

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