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Transcript: MGP_C57BL6NJ_T0021169.1

Description

SPEG complex locus [Source:MGI Symbol;Acc:MGI:109282]

Gene Synonyms

AW125581, Apeg1, BPEG, D1Bwg1450e, SPEG, SPEGalpha, SPEGbeta, mKIAA1297

Location

Chromosome 1: 78,896,319-78,954,320 forward strand.

Reference strain equivalent

Speg

About this transcript

This transcript has 41 exons, is annotated with 134 domains and features and maps to 502 oligo probes.

Gene

This transcript is a product of gene MGP_C57BL6NJ_G0016577.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C57BL6NJ_T0021169.1-108023262aaMGP_C57BL6NJ_P0021169
 
Protein coding
CCDS35626, CCDS48292, CCDS48293A0A087WSE3 A0A0R4J1J0 D3Z7T0
D6RI69 E9QQ25 F6RU40
Q62407 		Ensembl Canonical
MGP_C57BL6NJ_T0021178.1-98853009aaMGP_C57BL6NJ_P0021178
 
Protein coding
--
MGP_C57BL6NJ_T0021171.1-3393861aaMGP_C57BL6NJ_P0021171
 
Protein coding
--
MGP_C57BL6NJ_T0021181.1-1254113aaMGP_C57BL6NJ_P0021181
 
Protein coding
--
MGP_C57BL6NJ_T0021180.1-1078113aaMGP_C57BL6NJ_P0021180
 
Protein coding
--
MGP_C57BL6NJ_T0021170.1-932301aaMGP_C57BL6NJ_P0021170
 
Protein coding
--
MGP_C57BL6NJ_T0021182.1-917113aaMGP_C57BL6NJ_P0021182
 
Protein coding
--
MGP_C57BL6NJ_T0021179.1-833113aaMGP_C57BL6NJ_P0021179
 
Protein coding
--
MGP_C57BL6NJ_T0021176.1-643131aaMGP_C57BL6NJ_P0021176
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0021173.1-46384aaMGP_C57BL6NJ_P0021173
 
Nonsense mediated decay
--
MGP_C57BL6NJ_T0021177.1-1472No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0021174.1-336No protein-
 
Processed transcript
--
MGP_C57BL6NJ_T0021183.1-735No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0021175.1-616No protein-
 
Retained intron
--
MGP_C57BL6NJ_T0021172.1-295No protein-
 
Retained intron
--

Summary

Statistics

Exons: 41, Coding exons: 41, Transcript length: 10,802 bps, Translation length: 3,262 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62407

CCDS

This transcript is a member of the Mouse C57BL/6NJ CCDS set: CCDS35626, CCDS48292, CCDS48293

Version

MGP_C57BL6NJ_T0021169.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.