Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Custom tracks

Transcript: MGP_C57BL6NJ_T0026312.1

Description

collagen, type XVIII, alpha 1 [Source:MGI Symbol;Acc:MGI:88451]

Gene Synonyms

endostatin

Location

Reference strain equivalent

About this transcript

This transcript has 42 exons, is annotated with 44 domains and features and maps to 518 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0026313.1	-	6338	1774aa	MGP_C57BL6NJ_P0026313	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0026312.1	-	5063	1315aa	MGP_C57BL6NJ_P0026312	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23953, CCDS48604	D3Z556 D3Z5C2 E9QPX1 P39061	-
MGP_C57BL6NJ_T0026314.1	-	4791	1527aa	MGP_C57BL6NJ_P0026314	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0026316.1	-	1956	562aa	MGP_C57BL6NJ_P0026316	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0026315.1	-	717	161aa	MGP_C57BL6NJ_P0026315	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-

Protein summary