Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Custom tracks

Transcript: MGP_C57BL6NJ_T0023959.1

Description

lymphocyte antigen 9 [Source:MGI Symbol;Acc:MGI:96885]

Gene Synonyms

AI893573, CD229, Lgp100, Ly-9, SLAMF3, T100

Location

Reference strain equivalent

About this transcript

This transcript has 10 exons, is annotated with 29 domains and features and maps to 219 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C57BL6NJ_T0023959.1	-	2488	654aa	MGP_C57BL6NJ_P0023959	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35779, CCDS69978	E9PV93 E9PX73 M0QWN5 Q01965	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C57BL6NJ_T0023962.1	-	2155	636aa	MGP_C57BL6NJ_P0023962	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023960.1	-	2098	544aa	MGP_C57BL6NJ_P0023960	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C57BL6NJ_T0023961.1	-	2480	59aa	MGP_C57BL6NJ_P0023961	Nonsense mediated decay		-	-
MGP_C57BL6NJ_T0023963.1	-	1583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Protein summary