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Transcript: MGP_C3HHeJ_T0088171.1

Description

RNA binding protein gene with multiple splicing [Source:MGI Symbol;Acc:MGI:1334446]

Gene Synonyms

2010300K22Rik, 2700019M19Rik, AU017537, Hermes, RBP-MS, hermes

Location

Chromosome 8: 32,307,121-32,461,890 reverse strand.

Reference strain equivalent

Rbpms

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features and maps to 266 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0033217.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0088178.1-1042220aaMGP_C3HHeJ_P0088178
 
Protein coding
-Ensembl Canonical
MGP_C3HHeJ_T0088172.1-2377191aaMGP_C3HHeJ_P0088172
 
Protein coding
--
MGP_C3HHeJ_T0088171.1-2150197aaMGP_C3HHeJ_P0088171
 
Protein coding
CCDS40317, CCDS40318, CCDS72112Q9WVB0 S4R1A1 S4R1T1
S4R1Y2 S4R280 S4R2P3
T1ECW4 		-
MGP_C3HHeJ_T0088179.1-591159aaMGP_C3HHeJ_P0088179
 
Protein coding
--
MGP_C3HHeJ_T0088173.1-86793aaMGP_C3HHeJ_P0088173
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0088174.1-54970aaMGP_C3HHeJ_P0088174
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0088175.1-40557aaMGP_C3HHeJ_P0088175
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0088176.1-643No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0088180.1-324No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0088177.1-525No protein-
 
Retained intron
--

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,150 bps, Translation length: 197 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WVB0

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS40317, CCDS40318, CCDS72112

Version

MGP_C3HHeJ_T0088171.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.