Mouse C3H/HeJ (C3H_HeJ_v1)
Description

prominin 1 [Source:MGI Symbol;Acc:MGI:1100886]

Gene Synonyms

4932416E19Rik, AC133, CD133, Prom, Prom-1, Proml1

Location
Reference strain equivalent
About this transcript

This transcript has 28 exons, is annotated with 23 domains and features and maps to 196 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0071185.1-3966867aaMGP_C3HHeJ_P0071185
 
Protein coding
CCDS39082, CCDS51491, CCDS51492, CCDS51493, CCDS51494, CCDS51495, CCDS80275A0A0G2JDH9 A0A0G2JDS7 A0A0G2JE50
A0A0G2JE90 A0A0G2JG30 A0A0R4J0B0
G3X9J8 G5E8G5 Q8CDK8
Q8R056
Ensembl Canonical
MGP_C3HHeJ_T0071187.1-4089827aaMGP_C3HHeJ_P0071187
 
Protein coding
--
MGP_C3HHeJ_T0071188.1-3681842aaMGP_C3HHeJ_P0071188
 
Protein coding
--
MGP_C3HHeJ_T0071186.1-3664858aaMGP_C3HHeJ_P0071186
 
Protein coding
--
MGP_C3HHeJ_T0071191.1-3579842aaMGP_C3HHeJ_P0071191
 
Protein coding
--
MGP_C3HHeJ_T0071190.1-3534827aaMGP_C3HHeJ_P0071190
 
Protein coding
--
MGP_C3HHeJ_T0071192.1-3410834aaMGP_C3HHeJ_P0071192
 
Protein coding
--
MGP_C3HHeJ_T0071195.1-2728834aaMGP_C3HHeJ_P0071195
 
Protein coding
--
MGP_C3HHeJ_T0071194.1-2598809aaMGP_C3HHeJ_P0071194
 
Protein coding
--
MGP_C3HHeJ_T0071193.1-2583804aaMGP_C3HHeJ_P0071193
 
Protein coding
--
MGP_C3HHeJ_T0071189.1-108962aaMGP_C3HHeJ_P0071189
 
Protein coding
--
MGP_C3HHeJ_T0071201.1-59598aaMGP_C3HHeJ_P0071201
 
Protein coding
--
MGP_C3HHeJ_T0071197.1-725189aaMGP_C3HHeJ_P0071197
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0071200.1-724No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0071202.1-650No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0071199.1-1518No protein-
 
Retained intron
--
MGP_C3HHeJ_T0071196.1-880No protein-
 
Retained intron
--
MGP_C3HHeJ_T0071198.1-778No protein-
 
Retained intron
--
Statistics

Exons: 28, Coding exons: 26, Transcript length: 3,966 bps, Translation length: 867 residues

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS39082, CCDS51491, CCDS51492, CCDS51493, CCDS51494, CCDS51495, CCDS80275

Version

MGP_C3HHeJ_T0071185.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.