Transcript: MGP_C3HHeJ_T0069867.1

Description

calcium channel, voltage-dependent, alpha2/delta subunit 1 [Source:MGI Symbol;Acc:MGI:88295]

Gene Synonyms

Ca(v)alpha2delta1, Cacna2, Cchl2a

Location

Chromosome 5: 13,425,667-13,894,266 forward strand.

Reference strain equivalent

Cacna2d1

About this transcript

This transcript has 39 exons, is annotated with 17 domains and features and maps to 322 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0028999.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C3HHeJ_T0069871.1	-	3933	1103aa	MGP_C3HHeJ_P0069871	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C3HHeJ_T0069867.1	-	7436	1091aa	MGP_C3HHeJ_P0069867	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19096, CCDS51421, CCDS51422, CCDS51423, CCDS80212	E9Q1X8 O08532 Q14BH8 Q8C6Y3	-
MGP_C3HHeJ_T0069870.1	-	7311	1084aa	MGP_C3HHeJ_P0069870	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0069869.1	-	3882	1086aa	MGP_C3HHeJ_P0069869	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0069872.1	-	3879	1091aa	MGP_C3HHeJ_P0069872	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0069868.1	-	3861	1079aa	MGP_C3HHeJ_P0069868	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0069873.1	-	3499	1086aa	MGP_C3HHeJ_P0069873	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0069874.1	-	1263	100aa	MGP_C3HHeJ_P0069874	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0069876.1	-	1970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0069875.1	-	1866	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0069877.1	-	720	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0069878.1	-	543	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 39, Coding exons: 39, Transcript length: 7,436 bps, Translation length: 1,091 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08532

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS19096, CCDS51421, CCDS51422, CCDS51423, CCDS80212

Version

MGP_C3HHeJ_T0069867.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C3HHeJ_T0069867.1

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: MGP_C3HHeJ_T0069867.1

Summary

About Us

Get help

Our sister sites

Follow us