Transcript: MGP_C3HHeJ_T0062534.1

Description

DNA cross-link repair 1B [Source:MGI Symbol;Acc:MGI:2156057]

Gene Synonyms

AI452214, Apollo, SNMIB, Snm1b, mSNM1B

Location

Chromosome 3: 104,596,892-104,604,921 reverse strand.

Reference strain equivalent

Dclre1b

About this transcript

This transcript has 4 exons, is annotated with 9 domains and features and maps to 179 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0027400.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C3HHeJ_T0062534.1	-	3521	541aa	MGP_C3HHeJ_P0062534	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17694, CCDS17695	A0A0G2JF86 D6RFP8 Q8C7W7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C3HHeJ_T0062539.1	-	2315	213aa	MGP_C3HHeJ_P0062539	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0062536.1	-	1435	98aa	MGP_C3HHeJ_P0062536	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0062538.1	-	532	81aa	MGP_C3HHeJ_P0062538	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0062535.1	-	5961	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_C3HHeJ_T0062537.1	-	700	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 3,521 bps, Translation length: 541 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C7W7

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS17694, CCDS17695

Version

MGP_C3HHeJ_T0062534.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C3HHeJ_T0062534.1

Summary

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Transcript: MGP_C3HHeJ_T0062534.1

Summary

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