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Transcript: MGP_C3HHeJ_T0054147.1

Description

LIM homeobox protein 6 [Source:MGI Symbol;Acc:MGI:1306803]

Gene Synonyms

Lhx6.1

Location

Chromosome 2: 34,351,563-34,373,705 reverse strand.

Reference strain equivalent

Lhx6

About this transcript

This transcript has 8 exons, is annotated with 26 domains and features and maps to 216 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0025394.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0054150.1-3346392aaMGP_C3HHeJ_P0054150
 
Protein coding
-Ensembl Canonical
MGP_C3HHeJ_T0054151.1-3482363aaMGP_C3HHeJ_P0054151
 
Protein coding
--
MGP_C3HHeJ_T0054149.1-3379377aaMGP_C3HHeJ_P0054149
 
Protein coding
--
MGP_C3HHeJ_T0054148.1-3293363aaMGP_C3HHeJ_P0054148
 
Protein coding
--
MGP_C3HHeJ_T0054147.1-3189348aaMGP_C3HHeJ_P0054147
 
Protein coding
CCDS38110, CCDS38111, CCDS38112, CCDS38113E9QN32 H3BLG4 H9H9T0
Q9R1R0 		-
MGP_C3HHeJ_T0054153.1-1481348aaMGP_C3HHeJ_P0054153
 
Protein coding
--
MGP_C3HHeJ_T0054152.1-825170aaMGP_C3HHeJ_P0054152
 
Protein coding
--
MGP_C3HHeJ_T0054155.1-1548No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0054154.1-578No protein-
 
Retained intron
--

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,189 bps, Translation length: 348 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9R1R0

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS38110, CCDS38111, CCDS38112, CCDS38113

Version

MGP_C3HHeJ_T0054147.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.