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Transcript: MGP_C3HHeJ_T0046969.1

Description

mutS homolog 5 [Source:MGI Symbol;Acc:MGI:1329021]

Gene Synonyms

G7, Mut5

Location

Chromosome 17: 34,868,610-34,886,135 reverse strand.

Reference strain equivalent

Msh5

About this transcript

This transcript has 23 exons, is annotated with 5 domains and features and maps to 271 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0023335.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0046971.1-2883833aaMGP_C3HHeJ_P0046971
 
Protein coding
-Ensembl Canonical
MGP_C3HHeJ_T0046972.1-2675833aaMGP_C3HHeJ_P0046972
 
Protein coding
--
MGP_C3HHeJ_T0046975.1-2718499aaMGP_C3HHeJ_P0046975
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0046974.1-2630616aaMGP_C3HHeJ_P0046974
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0046976.1-240353aaMGP_C3HHeJ_P0046976
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0046973.1-175074aaMGP_C3HHeJ_P0046973
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0046981.1-59167aaMGP_C3HHeJ_P0046981
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0046970.1-535No protein-
 
Processed transcript
--
MGP_C3HHeJ_T0046978.1-1248No protein-
 
Retained intron
--
MGP_C3HHeJ_T0046980.1-855No protein-
 
Retained intron
--
MGP_C3HHeJ_T0046979.1-622No protein-
 
Retained intron
--
MGP_C3HHeJ_T0046977.1-279No protein-
 
Retained intron
--
MGP_C3HHeJ_T0046969.1-2581813aaMGP_C3HHeJ_P0046969
 
Unknown likely coding
CCDS28674A0A0R4IZY8 G3UWT5 G3UYF3
G3UYF6 G3UZ06 G3UZB5
-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 2,581 bps, Translation length: 813 residues

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS28674

Version

MGP_C3HHeJ_T0046969.1

Type

Unknown likely coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.