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Transcript: MGP_C3HHeJ_T0042085.1

Description

histone deacetylase 7 [Source:MGI Symbol;Acc:MGI:1891835]

Gene Synonyms

5830434K02Rik, HD7, HD7a, Hdac7a, mFLJ00062

Location

Chromosome 15: 98,493,343-98,533,791 reverse strand.

Reference strain equivalent

Hdac7

About this transcript

This transcript has 25 exons, is annotated with 30 domains and features and maps to 340 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0022015.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_C3HHeJ_T0042089.1-30571018aaMGP_C3HHeJ_P0042089
 
Protein coding
-Ensembl Canonical
MGP_C3HHeJ_T0042086.1-4226938aaMGP_C3HHeJ_P0042086
 
Protein coding
--
MGP_C3HHeJ_T0042088.1-4069946aaMGP_C3HHeJ_P0042088
 
Protein coding
--
MGP_C3HHeJ_T0042085.1-3988944aaMGP_C3HHeJ_P0042085
 
Protein coding
CCDS37188, CCDS57001, CCDS57002, CCDS57003, CCDS57004, CCDS57005, CCDS57006, CCDS57007E9PX62 E9PXW1 E9PXW8
E9PZG4 F6RY11 F6VIB5
Q8C2B3 		-
MGP_C3HHeJ_T0042092.1-770256aaMGP_C3HHeJ_P0042092
 
Protein coding
--
MGP_C3HHeJ_T0042091.1-639212aaMGP_C3HHeJ_P0042091
 
Protein coding
--
MGP_C3HHeJ_T0042090.1-2367636aaMGP_C3HHeJ_P0042090
 
Nonsense mediated decay
--
MGP_C3HHeJ_T0042087.1-1575No protein-
 
Retained intron
--

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 3,988 bps, Translation length: 944 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8C2B3

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS37188, CCDS57001, CCDS57002, CCDS57003, CCDS57004, CCDS57005, CCDS57006, CCDS57007

Version

MGP_C3HHeJ_T0042085.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.