Transcript: MGP_C3HHeJ_T0024611.1

Description

thymocyte selection associated [Source:MGI Symbol;Acc:MGI:2443552]

Gene Synonyms

E430004N04Rik, Gasp, Spot, Tsepa, thylex

Location

Chromosome 10: 26,660,082-26,867,915 forward strand.

Reference strain equivalent

Themis

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features and maps to 181 oligo probes.

Gene

This transcript is a product of gene MGP_C3HHeJ_G0016867.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_C3HHeJ_T0024611.1	-	5081	636aa	MGP_C3HHeJ_P0024611	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23758	E0CY68 E0CYT7 Q8BGW0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_C3HHeJ_T0024614.1	-	2361	595aa	MGP_C3HHeJ_P0024614	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0024612.1	-	2278	605aa	MGP_C3HHeJ_P0024612	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0024616.1	-	636	203aa	MGP_C3HHeJ_P0024616	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_C3HHeJ_T0024615.1	-	4845	94aa	MGP_C3HHeJ_P0024615	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0024617.1	-	1271	94aa	MGP_C3HHeJ_P0024617	Nonsense mediated decay		-	-
MGP_C3HHeJ_T0024613.1	-	3402	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 5,081 bps, Translation length: 636 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BGW0

CCDS

This transcript is a member of the Mouse C3H/HeJ CCDS set: CCDS23758

Version

MGP_C3HHeJ_T0024611.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_C3HHeJ_T0024611.1

Summary

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Transcript: MGP_C3HHeJ_T0024611.1

Summary

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