Transcript: MGP_BALBcJ_T0096429.1

Description

L1 cell adhesion molecule [Source:MGI Symbol;Acc:MGI:96721]

Gene Synonyms

CD171, L1, L1-NCAM, N-CAM-L1, NCAM-L1

Location

Chromosome X: 68,857,856-68,873,999 reverse strand.

Reference strain equivalent

L1cam

About this transcript

This transcript has 27 exons, is annotated with 74 domains and features and maps to 359 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0035789.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0096430.1	-	5118	1259aa	MGP_BALBcJ_P0096430	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0096429.1	-	5131	1255aa	MGP_BALBcJ_P0096429	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30215	A2AFG7 A2AFG8 B7ZCD3 F6UIL7 F7A5H7 Q6PGJ3	-
MGP_BALBcJ_T0096431.1	-	4116	1250aa	MGP_BALBcJ_P0096431	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0096441.1	-	571	83aa	MGP_BALBcJ_P0096441	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0096438.1	-	570	189aa	MGP_BALBcJ_P0096438	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0096433.1	-	466	144aa	MGP_BALBcJ_P0096433	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0096440.1	-	598	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0096439.1	-	1363	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0096436.1	-	856	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0096434.1	-	813	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0096432.1	-	705	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0096437.1	-	661	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0096435.1	-	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 27, Coding exons: 27, Transcript length: 5,131 bps, Translation length: 1,255 residues

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS30215

Version

MGP_BALBcJ_T0096429.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0096429.1

Summary

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Transcript: MGP_BALBcJ_T0096429.1

Summary

About Us

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