Mouse BALB/cJ (BALB_cJ_v1)
Description

ATPase, Ca++-sequestering [Source:MGI Symbol;Acc:MGI:1889008]

Gene Synonyms

1700121J11Rik, ATP2C1A, AW061228, BCPM, D930003G21Rik, HHD, PMR1, Pmr1, SPCA, pmr1

Reference strain equivalent
About this transcript

This transcript has 24 exons, is annotated with 9 domains and features and maps to 190 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0094051.1-4708952aaMGP_BALBcJ_P0094051
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0094049.1-5141918aaMGP_BALBcJ_P0094049
 
Protein coding
--
MGP_BALBcJ_T0094050.1-4918918aaMGP_BALBcJ_P0094050
 
Protein coding
--
MGP_BALBcJ_T0094047.1-2781926aaMGP_BALBcJ_P0094047
 
Protein coding
--
MGP_BALBcJ_T0094048.1-2664887aaMGP_BALBcJ_P0094048
 
Protein coding
--
MGP_BALBcJ_T0094055.1-2408669aaMGP_BALBcJ_P0094055
 
Protein coding
--
MGP_BALBcJ_T0094058.1-899253aaMGP_BALBcJ_P0094058
 
Protein coding
--
MGP_BALBcJ_T0094061.1-885230aaMGP_BALBcJ_P0094061
 
Protein coding
--
MGP_BALBcJ_T0094064.1-827144aaMGP_BALBcJ_P0094064
 
Protein coding
--
MGP_BALBcJ_T0094059.1-823208aaMGP_BALBcJ_P0094059
 
Protein coding
--
MGP_BALBcJ_T0094063.1-710177aaMGP_BALBcJ_P0094063
 
Protein coding
--
MGP_BALBcJ_T0094065.1-581111aaMGP_BALBcJ_P0094065
 
Protein coding
--
MGP_BALBcJ_T0094046.1-2476786aaMGP_BALBcJ_P0094046
 
Nonsense mediated decay
CCDS40752, CCDS57697, CCDS57698H3BIX7 H3BJ99 H3BJJ5
H3BJY0 H3BK57 H3BKB1
H3BL44 H3BLC2 H3BLI6
Q3UZR5 Q80XR2 Q8BMS7
-
MGP_BALBcJ_T0094052.1-1513No protein-
 
Processed transcript
--
MGP_BALBcJ_T0094057.1-1072No protein-
 
Processed transcript
--
MGP_BALBcJ_T0094062.1-833No protein-
 
Processed transcript
--
MGP_BALBcJ_T0094066.1-1456No protein-
 
Retained intron
--
MGP_BALBcJ_T0094067.1-1413No protein-
 
Retained intron
--
MGP_BALBcJ_T0094060.1-939No protein-
 
Retained intron
--
MGP_BALBcJ_T0094054.1-693No protein-
 
Retained intron
--
MGP_BALBcJ_T0094056.1-647No protein-
 
Retained intron
--
MGP_BALBcJ_T0094053.1-257No protein-
 
Retained intron
--
Statistics

Exons: 24, Coding exons: 23, Transcript length: 2,476 bps, Translation length: 786 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80XR2

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS40752, CCDS57697, CCDS57698

Version

MGP_BALBcJ_T0094046.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.