Transcript: MGP_BALBcJ_T0093025.1

Description

general transcription factor II A, 2 [Source:MGI Symbol;Acc:MGI:1933289]

Gene Synonyms

12kDa, TFIIA-gamma, TfIIg, Tfiia2

Location

Chromosome 9: 67,353,453-67,363,781 forward strand.

Reference strain equivalent

Gtf2a2

About this transcript

This transcript has 5 exons, is annotated with 76 domains and features and maps to 156 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0034968.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0093031.1	-	1034	109aa	MGP_BALBcJ_P0093031	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0093025.1	-	893	109aa	MGP_BALBcJ_P0093025	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52851, CCDS72269	D3Z793 D3Z7C2 D3Z7S8 D6RIQ7 Q05C74 Q3TE88 Q80ZM7	-
MGP_BALBcJ_T0093027.1	-	622	68aa	MGP_BALBcJ_P0093027	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0093035.1	-	588	91aa	MGP_BALBcJ_P0093035	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0093032.1	-	491	87aa	MGP_BALBcJ_P0093032	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0093028.1	-	888	76aa	MGP_BALBcJ_P0093028	Nonsense mediated decay		-	-
MGP_BALBcJ_T0093036.1	-	791	62aa	MGP_BALBcJ_P0093036	Nonsense mediated decay		-	-
MGP_BALBcJ_T0093029.1	-	833	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0093037.1	-	659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0093030.1	-	1619	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093026.1	-	1199	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093033.1	-	795	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093039.1	-	769	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093038.1	-	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0093034.1	-	425	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 893 bps, Translation length: 109 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80ZM7

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS52851, CCDS72269

Version

MGP_BALBcJ_T0093025.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0093025.1

Summary

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Transcript: MGP_BALBcJ_T0093025.1

Summary

About Us

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