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Transcript: MGP_BALBcJ_T0092201.1

Description

cell adhesion molecule 1 [Source:MGI Symbol;Acc:MGI:1889272]

Gene Synonyms

2900073G06Rik, 3100001I08Rik, AI987920, Bl2, Igsf4, Igsf4,GN Necl2,GN Ra175,GN Syncam, Igsf4a, Necl2, RA175, RA175A, RA175B, RA175C, RA175N, ST17, SgIGSF, SynCam, SynCam1, Tslc1

Location

Chromosome 9: 44,618,406-44,941,030 forward strand.

Reference strain equivalent

Cadm1

About this transcript

This transcript has 10 exons, is annotated with 34 domains and features and maps to 379 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0034728.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0092202.1-1784474aaMGP_BALBcJ_P0092202
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0092201.1-4484428aaMGP_BALBcJ_P0092201
 
Protein coding
CCDS23147, CCDS23148, CCDS23149, CCDS23150, CCDS80990E0CY16 E9PYN1 Q8R5M8
-
MGP_BALBcJ_T0092204.1-4446445aaMGP_BALBcJ_P0092204
 
Protein coding
--
MGP_BALBcJ_T0092205.1-2126456aaMGP_BALBcJ_P0092205
 
Protein coding
--
MGP_BALBcJ_T0092203.1-1643390aaMGP_BALBcJ_P0092203
 
Protein coding
--
MGP_BALBcJ_T0092209.1-1254417aaMGP_BALBcJ_P0092209
 
Protein coding
--
MGP_BALBcJ_T0092208.1-1120No protein-
 
Processed transcript
--
MGP_BALBcJ_T0092207.1-4788No protein-
 
Retained intron
--
MGP_BALBcJ_T0092206.1-1371No protein-
 
Retained intron
--

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,484 bps, Translation length: 428 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8R5M8

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS23147, CCDS23148, CCDS23149, CCDS23150, CCDS80990

Version

MGP_BALBcJ_T0092201.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.