Transcript: MGP_BALBcJ_T0090618.1

Description

cadherin 13 [Source:MGI Symbol;Acc:MGI:99551]

Gene Synonyms

4932416G01Rik, Cdht, T-cadherin, Tcad

Location

Chromosome 8: 116,745,480-117,800,025 forward strand.

Reference strain equivalent

Cdh13

About this transcript

This transcript has 14 exons, is annotated with 48 domains and features and maps to 445 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0034152.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0090618.1	-	3785	714aa	MGP_BALBcJ_P0090618	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52682	Q9WTR5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0090623.1	-	2708	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0090624.1	-	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0090622.1	-	4565	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0090619.1	-	1616	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0090620.1	-	1535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0090621.1	-	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 3,785 bps, Translation length: 714 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WTR5

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS52682

Version

MGP_BALBcJ_T0090618.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0090618.1

Summary

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Transcript: MGP_BALBcJ_T0090618.1

Summary

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