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Transcript: MGP_BALBcJ_T0088608.1

Description

RNA binding protein gene with multiple splicing [Source:MGI Symbol;Acc:MGI:1334446]

Gene Synonyms

2010300K22Rik, 2700019M19Rik, AU017537, Hermes, RBP-MS, hermes

Location

Chromosome 8: 31,133,976-31,284,178 reverse strand.

Reference strain equivalent

Rbpms

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features and maps to 266 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0033505.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0088618.1-1042220aaMGP_BALBcJ_P0088618
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0088609.1-2549197aaMGP_BALBcJ_P0088609
 
Protein coding
--
MGP_BALBcJ_T0088608.1-2458197aaMGP_BALBcJ_P0088608
 
Protein coding
CCDS40317, CCDS40318, CCDS72112Q9WVB0 S4R1A1 S4R1T1
S4R1Y2 S4R280 S4R2P3
T1ECW4 		-
MGP_BALBcJ_T0088610.1-2377191aaMGP_BALBcJ_P0088610
 
Protein coding
--
MGP_BALBcJ_T0088620.1-591159aaMGP_BALBcJ_P0088620
 
Protein coding
--
MGP_BALBcJ_T0088619.1-45964aaMGP_BALBcJ_P0088619
 
Protein coding
--
MGP_BALBcJ_T0088611.1-1385197aaMGP_BALBcJ_P0088611
 
Nonsense mediated decay
--
MGP_BALBcJ_T0088612.1-86793aaMGP_BALBcJ_P0088612
 
Nonsense mediated decay
--
MGP_BALBcJ_T0088613.1-54970aaMGP_BALBcJ_P0088613
 
Nonsense mediated decay
--
MGP_BALBcJ_T0088614.1-40557aaMGP_BALBcJ_P0088614
 
Nonsense mediated decay
--
MGP_BALBcJ_T0088615.1-643No protein-
 
Processed transcript
--
MGP_BALBcJ_T0088621.1-324No protein-
 
Processed transcript
--
MGP_BALBcJ_T0088616.1-525No protein-
 
Retained intron
--
MGP_BALBcJ_T0088617.1-18962aaMGP_BALBcJ_P0088617
 
Unknown likely coding
--

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 2,458 bps, Translation length: 197 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9WVB0

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS40317, CCDS40318, CCDS72112

Version

MGP_BALBcJ_T0088608.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.