Transcript: MGP_BALBcJ_T0082330.1

Description

platelet-activating factor acetylhydrolase, isoform 1b, subunit 3 [Source:MGI Symbol;Acc:MGI:108414]

Gene Synonyms

Pafahg, mus[g]

Location

Chromosome 7: 23,354,933-23,357,861 reverse strand.

Reference strain equivalent

Pafah1b3

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features and maps to 185 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0031846.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0082330.1	-	892	232aa	MGP_BALBcJ_P0082330	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20979	D3Z2X5 D3Z7E6 Q3TJC2 Q61205 Q8CA83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0082332.1	-	859	143aa	MGP_BALBcJ_P0082332	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0082333.1	-	679	157aa	MGP_BALBcJ_P0082333	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0082335.1	-	368	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0082334.1	-	1106	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0082331.1	-	833	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 892 bps, Translation length: 232 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61205

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS20979

Version

MGP_BALBcJ_T0082330.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0082330.1

Summary

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Transcript: MGP_BALBcJ_T0082330.1

Summary

About Us

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