Transcript: MGP_BALBcJ_T0082287.1

Description

glutamate receptor, ionotropic, kainate 5 (gamma 2) [Source:MGI Symbol;Acc:MGI:95818]

Gene Synonyms

GluK5, GluRgamma2, KA2

Location

Chromosome 7: 23,051,925-23,115,646 reverse strand.

Reference strain equivalent

Grik5

About this transcript

This transcript has 20 exons, is annotated with 5 domains and features and maps to 266 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0031838.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0082289.1	-	3763	979aa	MGP_BALBcJ_P0082289	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0082288.1	-	4061	270aa	MGP_BALBcJ_P0082288	Nonsense mediated decay		-	-
MGP_BALBcJ_T0082287.1	-	3597	130aa	MGP_BALBcJ_P0082287	Nonsense mediated decay	CCDS20970	A0A0U1RPQ6 A0A0U1RQ33 Q61626	-
MGP_BALBcJ_T0082293.1	-	455	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0082290.1	-	880	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0082291.1	-	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0082292.1	-	600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 20, Coding exons: 4, Transcript length: 3,597 bps, Translation length: 130 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q61626

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS20970

Version

MGP_BALBcJ_T0082287.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0082287.1

Summary

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Transcript: MGP_BALBcJ_T0082287.1

Summary

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