Ensembl mirror
More ▼
Search »
Mouse BALB/cJ (BALB_cJ_v1) ▼

Favourite species

All species

Recent locations

Transcript-based displays

Configure this page

Custom tracks

Export data

Bookmark this page

Transcript: MGP_BALBcJ_T0080036.1

Description

protein tyrosine phosphatase, non-receptor type 6 [Source:MGI Symbol;Acc:MGI:96055]

Gene Synonyms

70Z-SHP, Hcp, Hcph, PTPTY-42, Ptp1C, SH-PTP1, SHP-1, hcp, me

Location

Chromosome 6: 122,805,776-122,818,235 reverse strand.

Reference strain equivalent

Ptpn6

About this transcript

This transcript has 16 exons, is annotated with 41 domains and features and maps to 286 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0031240.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0080038.1-2308597aaMGP_BALBcJ_P0080038
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0080037.1-2226597aaMGP_BALBcJ_P0080037
 
Protein coding
--
MGP_BALBcJ_T0080036.1-2219595aaMGP_BALBcJ_P0080036
 
Protein coding
CCDS39628, CCDS51908G3UWU7 G3UXM2 G3UYY5
G3UZU6 P29351 Q3UCJ0
-
MGP_BALBcJ_T0080040.1-1743556aaMGP_BALBcJ_P0080040
 
Protein coding
--
MGP_BALBcJ_T0080039.1-456100aaMGP_BALBcJ_P0080039
 
Protein coding
--
MGP_BALBcJ_T0080045.1-33067aaMGP_BALBcJ_P0080045
 
Protein coding
--
MGP_BALBcJ_T0080041.1-13444aaMGP_BALBcJ_P0080041
 
Protein coding
--
MGP_BALBcJ_T0080042.1-12040aaMGP_BALBcJ_P0080042
 
Protein coding
--
MGP_BALBcJ_T0080044.1-198No protein-
 
Processed transcript
--
MGP_BALBcJ_T0080043.1-421No protein-
 
Retained intron
--
MGP_BALBcJ_T0080046.1-371No protein-
 
Retained intron
--

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,219 bps, Translation length: 595 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P29351

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS39628, CCDS51908

Version

MGP_BALBcJ_T0080036.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.