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Transcript: MGP_BALBcJ_T0079587.1

Description

arachidonate 5-lipoxygenase [Source:MGI Symbol;Acc:MGI:87999]

Gene Synonyms

5-LO, 5-LOX, 5LO, 5LX, AI850497, F730011J02

Location

Chromosome 6: 114,321,432-114,372,958 reverse strand.

Reference strain equivalent

Alox5

About this transcript

This transcript has 14 exons, is annotated with 29 domains and features and maps to 212 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0031147.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0079587.1-2821674aaMGP_BALBcJ_P0079587
 
Protein coding
CCDS20452A0A0N4SW45 E9Q6H6 E9QA93
P48999 		Ensembl Canonical
MGP_BALBcJ_T0079591.1-1929642aaMGP_BALBcJ_P0079591
 
Protein coding
--
MGP_BALBcJ_T0079592.1-1854617aaMGP_BALBcJ_P0079592
 
Protein coding
--
MGP_BALBcJ_T0079590.1-1787434aaMGP_BALBcJ_P0079590
 
Nonsense mediated decay
--
MGP_BALBcJ_T0079594.1-659No protein-
 
Processed transcript
--
MGP_BALBcJ_T0079588.1-3576No protein-
 
Retained intron
--
MGP_BALBcJ_T0079589.1-956No protein-
 
Retained intron
--
MGP_BALBcJ_T0079593.1-546No protein-
 
Retained intron
--

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,821 bps, Translation length: 674 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48999

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS20452

Version

MGP_BALBcJ_T0079587.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.