Transcript: MGP_BALBcJ_T0077208.1

Description

caspase 2 [Source:MGI Symbol;Acc:MGI:97295]

Gene Synonyms

CASP-2, Caspase-2, ICH-1, Ich-1, Ich1, NEDD-2, Nedd-2, Nedd2

Location

Chromosome 6: 39,236,683-39,254,262 forward strand.

Reference strain equivalent

Casp2

About this transcript

This transcript has 11 exons, is annotated with 29 domains and features and maps to 232 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0030628.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0077208.1	-	3529	452aa	MGP_BALBcJ_P0077208	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS20064	D6RFN6 P29594	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0077210.1	-	1439	343aa	MGP_BALBcJ_P0077210	Nonsense mediated decay		-	-
MGP_BALBcJ_T0077216.1	-	704	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0077215.1	-	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0077217.1	-	494	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0077211.1	-	396	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0077213.1	-	384	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0077209.1	-	3325	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0077214.1	-	808	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0077212.1	-	615	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,529 bps, Translation length: 452 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P29594

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS20064

Version

MGP_BALBcJ_T0077208.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0077208.1

Summary

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Transcript: MGP_BALBcJ_T0077208.1

Summary

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