Transcript: MGP_BALBcJ_T0076493.1

Description

protein tyrosine phosphatase, receptor type Z, polypeptide 1 [Source:MGI Symbol;Acc:MGI:97816]

Gene Synonyms

AI850339, DSD-1-PG, PTPbeta, PTPzeta, Ptprz, Ptpz, R-PTP-zeta, RPTPz, Rptpbeta, phosphacan

Location

Chromosome 6: 19,639,352-19,818,478 forward strand.

Reference strain equivalent

Ptprz1

About this transcript

This transcript has 31 exons, is annotated with 54 domains and features and maps to 404 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0030468.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0076493.1	-	8062	2312aa	MGP_BALBcJ_P0076493	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39437, CCDS80493	A0A0J9YVD2 B2RXS8 B9EKR1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0076494.1	-	6871	1612aa	MGP_BALBcJ_P0076494	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0076495.1	-	4947	1463aa	MGP_BALBcJ_P0076495	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0076498.1	-	3232	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0076497.1	-	1394	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0076496.1	-	435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 31, Coding exons: 30, Transcript length: 8,062 bps, Translation length: 2,312 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B9EKR1

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS39437, CCDS80493

Version

MGP_BALBcJ_T0076493.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0076493.1

Summary

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Transcript: MGP_BALBcJ_T0076493.1

Summary

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