Transcript: MGP_BALBcJ_T0076184.1

Description

sarcoglycan, epsilon [Source:MGI Symbol;Acc:MGI:1329042]

Gene Synonyms

e-SG

Location

Chromosome 6: 1,394,958-1,468,600 reverse strand.

Reference strain equivalent

Sgce

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features and maps to 190 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0030411.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0076185.1	-	1775	473aa	MGP_BALBcJ_P0076185	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0076186.1	-	1702	451aa	MGP_BALBcJ_P0076186	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0076184.1	-	1695	437aa	MGP_BALBcJ_P0076184	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51715, CCDS51716, CCDS51717, CCDS51718	D3Z572 E9PX46 F6R6P2 F6ULV5 F6WKE4 F8WGM3 O70258	-
MGP_BALBcJ_T0076189.1	-	1655	434aa	MGP_BALBcJ_P0076189	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0076190.1	-	1618	443aa	MGP_BALBcJ_P0076190	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0076188.1	-	1546	428aa	MGP_BALBcJ_P0076188	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0076187.1	-	1521	396aa	MGP_BALBcJ_P0076187	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0076194.1	-	936	58aa	MGP_BALBcJ_P0076194	Nonsense mediated decay		-	-
MGP_BALBcJ_T0076193.1	-	821	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0076195.1	-	4416	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0076196.1	-	3066	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0076192.1	-	2212	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0076191.1	-	1831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,695 bps, Translation length: 437 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O70258

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS51715, CCDS51716, CCDS51717, CCDS51718

Version

MGP_BALBcJ_T0076184.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0076184.1

Summary

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Transcript: MGP_BALBcJ_T0076184.1

Summary

About Us

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