Transcript: MGP_BALBcJ_T0071102.1

Description

Wolf-Hirschhorn syndrome candidate 1 (human) [Source:MGI Symbol;Acc:MGI:1276574]

Gene Synonyms

5830445G22Rik, 9430010A17Rik, AW555663, C130020C13Rik, D030027O06Rik, D930023B08Rik, Kiaa1090, MMSET, NSD2, Nsd2, Whsc1l, mKIAA1090

Location

Chromosome 5: 31,506,863-31,586,110 forward strand.

Reference strain equivalent

Nsd2

About this transcript

This transcript has 23 exons, is annotated with 74 domains and features and maps to 456 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0029431.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0071102.1	-	7142	1366aa	MGP_BALBcJ_P0071102	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS51467, CCDS51468	A0A0J9YUM7 D3Z229 D3Z3E0 D3Z3E4 F6S6G6 F6Y765 Q8BVE8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0071106.1	-	7781	647aa	MGP_BALBcJ_P0071106	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0071108.1	-	6919	1366aa	MGP_BALBcJ_P0071108	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0071111.1	-	6318	166aa	MGP_BALBcJ_P0071111	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0071103.1	-	5736	629aa	MGP_BALBcJ_P0071103	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0071109.1	-	4633	1365aa	MGP_BALBcJ_P0071109	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0071104.1	-	753	225aa	MGP_BALBcJ_P0071104	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0071105.1	-	7153	647aa	MGP_BALBcJ_P0071105	Nonsense mediated decay		-	-
MGP_BALBcJ_T0071107.1	-	7020	647aa	MGP_BALBcJ_P0071107	Nonsense mediated decay		-	-
MGP_BALBcJ_T0071110.1	-	4473	533aa	MGP_BALBcJ_P0071110	Nonsense mediated decay		-	-
MGP_BALBcJ_T0071113.1	-	2269	272aa	MGP_BALBcJ_P0071113	Nonsense mediated decay		-	-
MGP_BALBcJ_T0071112.1	-	1002	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0071115.1	-	606	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0071116.1	-	537	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0071114.1	-	454	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 23, Coding exons: 21, Transcript length: 7,142 bps, Translation length: 1,366 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8BVE8

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS51467, CCDS51468

Version

MGP_BALBcJ_T0071102.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0071102.1

Summary

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Transcript: MGP_BALBcJ_T0071102.1

Summary

About Us

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