Transcript: MGP_BALBcJ_T0070887.1

Description

intraflagellar transport 172 [Source:MGI Symbol;Acc:MGI:2682064]

Gene Synonyms

4930553F24Rik, Kiaa1179, Slb, Wim, avc1, wim

Location

Chromosome 5: 28,799,028-28,837,262 reverse strand.

Reference strain equivalent

Ift172

About this transcript

This transcript has 48 exons, is annotated with 23 domains and features and maps to 474 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0029399.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0070887.1	-	5403	1749aa	MGP_BALBcJ_P0070887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39054	A0A0J9YU41 A0A0J9YUJ7 A0A0J9YV04 Q6VH22	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0070893.1	-	775	258aa	MGP_BALBcJ_P0070893	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0070894.1	-	727	241aa	MGP_BALBcJ_P0070894	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0070897.1	-	405	83aa	MGP_BALBcJ_P0070897	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0070895.1	-	2063	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0070891.1	-	785	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0070888.1	-	742	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0070889.1	-	563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0070890.1	-	473	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0070896.1	-	430	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0070892.1	-	409	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 48, Coding exons: 48, Transcript length: 5,403 bps, Translation length: 1,749 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6VH22

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS39054

Version

MGP_BALBcJ_T0070887.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0070887.1

Summary

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Transcript: MGP_BALBcJ_T0070887.1

Summary

About Us

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