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Transcript: MGP_BALBcJ_T0070241.1

Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C [Source:MGI Symbol;Acc:MGI:107557]

Gene Synonyms

1110036B02Rik, SemE, Semae

Location

Chromosome 5: 14,933,133-15,086,126 forward strand.

Reference strain equivalent

Sema3c

About this transcript

This transcript has 19 exons, is annotated with 21 domains and features and maps to 353 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0029282.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0070241.1-5491751aaMGP_BALBcJ_P0070241
 
Protein coding
CCDS19099E9PXL2 E9Q0Z0 Q62181
Ensembl Canonical
MGP_BALBcJ_T0070244.1-785226aaMGP_BALBcJ_P0070244
 
Protein coding
--
MGP_BALBcJ_T0070242.1-114242aaMGP_BALBcJ_P0070242
 
Nonsense mediated decay
--
MGP_BALBcJ_T0070245.1-4075No protein-
 
Retained intron
--
MGP_BALBcJ_T0070243.1-1550No protein-
 
Retained intron
--

Summary

Statistics

Exons: 19, Coding exons: 17, Transcript length: 5,491 bps, Translation length: 751 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q62181

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS19099

Version

MGP_BALBcJ_T0070241.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.