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Transcript: MGP_BALBcJ_T0069169.1

Description

procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 [Source:MGI Symbol;Acc:MGI:99907]

Gene Synonyms

2410042F05Rik, AI854890, AV007929, LH1, Lh1, Plod, lysyl hydroxylase 1

Location

Chromosome 4: 145,839,743-145,866,871 reverse strand.

Reference strain equivalent

Plod1

About this transcript

This transcript has 19 exons, is annotated with 12 domains and features and maps to 264 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0029091.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0069169.1-3243728aaMGP_BALBcJ_P0069169
 
Protein coding
CCDS18924A8Y5E6 F6WNR1 Q9R0E2
Ensembl Canonical
MGP_BALBcJ_T0069173.1-1059226aaMGP_BALBcJ_P0069173
 
Protein coding
--
MGP_BALBcJ_T0069170.1-805268aaMGP_BALBcJ_P0069170
 
Protein coding
--
MGP_BALBcJ_T0069174.1-358No protein-
 
Processed transcript
--
MGP_BALBcJ_T0069171.1-4089No protein-
 
Retained intron
--
MGP_BALBcJ_T0069172.1-512No protein-
 
Retained intron
--

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 3,243 bps, Translation length: 728 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9R0E2

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS18924

Version

MGP_BALBcJ_T0069169.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.