Transcript: MGP_BALBcJ_T0062437.1

Description

pre-mRNA processing factor 3 [Source:MGI Symbol;Acc:MGI:1918017]

Gene Synonyms

3632413F13Rik

Location

Chromosome 3: 93,362,588-93,389,596 reverse strand.

Reference strain equivalent

Prpf3

About this transcript

This transcript has 16 exons, is annotated with 23 domains and features and maps to 217 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0027566.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0062437.1	-	2933	683aa	MGP_BALBcJ_P0062437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17621	E0CYD0 F6T4V0 Q922U1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0062441.1	-	2732	683aa	MGP_BALBcJ_P0062441	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0062438.1	-	575	114aa	MGP_BALBcJ_P0062438	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0062444.1	-	800	101aa	MGP_BALBcJ_P0062444	Nonsense mediated decay		-	-
MGP_BALBcJ_T0062442.1	-	554	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0062439.1	-	2548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0062443.1	-	1800	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0062445.1	-	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0062440.1	-	592	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,933 bps, Translation length: 683 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q922U1

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS17621

Version

MGP_BALBcJ_T0062437.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0062437.1

Summary

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Transcript: MGP_BALBcJ_T0062437.1

Summary

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