Transcript: MGP_BALBcJ_T0061946.1

Description

tropomyosin 3, gamma [Source:MGI Symbol;Acc:MGI:1890149]

Gene Synonyms

TM30nm, TMnm, Tm5NM, Tpm-5, Tpm5, Trop-5, gamma-TM, hTM30nm, hTMnm, skalphaTM.2

Location

Chromosome 3: 87,310,942-87,330,671 forward strand.

Reference strain equivalent

Tpm3

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features and maps to 250 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0027426.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0061946.1	-	1139	284aa	MGP_BALBcJ_P0061946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38499, CCDS57223, CCDS79961	A0A0R4J1P2 D3YVR0 D3Z6I8 E9Q5J9 E9Q7Q3 P21107 Q58E70	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0061950.1	-	2035	248aa	MGP_BALBcJ_P0061950	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0061949.1	-	1090	247aa	MGP_BALBcJ_P0061949	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0061957.1	-	509	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0061947.1	-	2372	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0061956.1	-	688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0061948.1	-	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0061955.1	-	510	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0061952.1	-	427	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0061953.1	-	376	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0061954.1	-	357	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0061951.1	-	302	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,139 bps, Translation length: 284 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21107

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS38499, CCDS57223, CCDS79961

Version

MGP_BALBcJ_T0061946.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0061946.1

Summary

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Transcript: MGP_BALBcJ_T0061946.1

Summary

About Us

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