Transcript: MGP_BALBcJ_T0060125.1

Description

Hermansky-Pudlak syndrome 3 [Source:MGI Symbol;Acc:MGI:2153839]

Gene Synonyms

Coa, coa

Location

Chromosome 3: 16,875,642-16,916,214 reverse strand.

Reference strain equivalent

Hps3

About this transcript

This transcript has 18 exons, is annotated with 9 domains and features and maps to 253 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0027070.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0060125.1	-	3935	1002aa	MGP_BALBcJ_P0060125	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS17260, CCDS50872	E9PZY1 Q91VB4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0060128.1	-	3385	870aa	MGP_BALBcJ_P0060128	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0060133.1	-	2292	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0060127.1	-	1987	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0060129.1	-	988	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0060135.1	-	360	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0060126.1	-	3995	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0060134.1	-	3824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0060131.1	-	3395	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0060130.1	-	3272	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0060132.1	-	2598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 3,935 bps, Translation length: 1,002 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q91VB4

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS17260, CCDS50872

Version

MGP_BALBcJ_T0060125.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0060125.1

Summary

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Transcript: MGP_BALBcJ_T0060125.1

Summary

About Us

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