Transcript: MGP_BALBcJ_T0055355.1

Description

homeobox D3 [Source:MGI Symbol;Acc:MGI:96207]

Gene Synonyms

Hox-4.1, Hox-5.5, Hoxd-3

Location

Chromosome 2: 72,280,340-72,316,835 forward strand.

Reference strain equivalent

Hoxd3

About this transcript

This transcript has 3 exons, is annotated with 24 domains and features and maps to 234 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0025823.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0055355.1	-	2968	433aa	MGP_BALBcJ_P0055355	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS38149	G3UZS5 G3UZU1 P09027 Q3UZR4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0055361.1	-	2413	433aa	MGP_BALBcJ_P0055361	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0055362.1	-	2292	433aa	MGP_BALBcJ_P0055362	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0055363.1	-	822	113aa	MGP_BALBcJ_P0055363	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0055360.1	-	415	67aa	MGP_BALBcJ_P0055360	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0055364.1	-	2721	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 2,968 bps, Translation length: 433 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P09027

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS38149

Version

MGP_BALBcJ_T0055355.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0055355.1

Summary

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Transcript: MGP_BALBcJ_T0055355.1

Summary

About Us

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