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Transcript: MGP_BALBcJ_T0054661.1

Description

methyl-CpG binding domain protein 5 [Source:MGI Symbol;Acc:MGI:2138934]

Gene Synonyms

9430004D19Rik, AA536666, AI426407, C030040A15Rik, Gm1630, OTTMUSG00000012483

Location

Chromosome 2: 46,394,441-46,703,666 forward strand.

Reference strain equivalent

Mbd5

About this transcript

This transcript has 11 exons, is annotated with 20 domains and features and maps to 218 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0025692.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0054669.1-85311728aaMGP_BALBcJ_P0054669
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0054661.1-6036856aaMGP_BALBcJ_P0054661
 
Protein coding
CCDS38122, CCDS71051A0A0G2JEL9 A0A0G2JF81 A0A0G2JFF3
A0A0G2JG39 B1AYB5 B1AYB6
B1AYB7 F6Q8U1 Q3TTF1
-
MGP_BALBcJ_T0054663.1-59781498aaMGP_BALBcJ_P0054663
 
Protein coding
--
MGP_BALBcJ_T0054671.1-37421066aaMGP_BALBcJ_P0054671
 
Protein coding
--
MGP_BALBcJ_T0054675.1-66076aaMGP_BALBcJ_P0054675
 
Protein coding
--
MGP_BALBcJ_T0054670.1-360119aaMGP_BALBcJ_P0054670
 
Protein coding
--
MGP_BALBcJ_T0054672.1-6197435aaMGP_BALBcJ_P0054672
 
Nonsense mediated decay
--
MGP_BALBcJ_T0054674.1-928113aaMGP_BALBcJ_P0054674
 
Nonsense mediated decay
--
MGP_BALBcJ_T0054673.1-785155aaMGP_BALBcJ_P0054673
 
Nonsense mediated decay
--
MGP_BALBcJ_T0054664.1-3401No protein-
 
Processed transcript
--
MGP_BALBcJ_T0054667.1-713No protein-
 
Processed transcript
--
MGP_BALBcJ_T0054662.1-621No protein-
 
Processed transcript
--
MGP_BALBcJ_T0054665.1-608No protein-
 
Processed transcript
--
MGP_BALBcJ_T0054666.1-501No protein-
 
Processed transcript
--
MGP_BALBcJ_T0054668.1-351No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 11, Coding exons: 4, Transcript length: 6,036 bps, Translation length: 856 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: B1AYB6

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS38122, CCDS71051

Version

MGP_BALBcJ_T0054661.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.