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Transcript: MGP_BALBcJ_T0049710.1

Description

synaptopodin [Source:MGI Symbol;Acc:MGI:1099446]

Gene Synonyms

9030217H17Rik, 9130229N11, 9330140I15Rik, AW046661, Kiaa1029

Location

Chromosome 18: 57,956,846-57,987,438 reverse strand.

Reference strain equivalent

Synpo

About this transcript

This transcript has 3 exons, is annotated with 29 domains and features and maps to 205 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0024431.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0049712.1-51591100aaMGP_BALBcJ_P0049712
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0049710.1-5060901aaMGP_BALBcJ_P0049710
 
Protein coding
CCDS37833, CCDS50298E0CYK1 E9Q3E2 Q3U336
Q3URF1 Q8CC35 		-
MGP_BALBcJ_T0049716.1-5039929aaMGP_BALBcJ_P0049716
 
Protein coding
--
MGP_BALBcJ_T0049711.1-4970901aaMGP_BALBcJ_P0049711
 
Protein coding
--
MGP_BALBcJ_T0049715.1-4479690aaMGP_BALBcJ_P0049715
 
Protein coding
--
MGP_BALBcJ_T0049714.1-4442690aaMGP_BALBcJ_P0049714
 
Protein coding
--
MGP_BALBcJ_T0049717.1-47715aaMGP_BALBcJ_P0049717
 
Protein coding
--
MGP_BALBcJ_T0049713.1-2601No protein-
 
Processed transcript
--
MGP_BALBcJ_T0049719.1-1924No protein-
 
Processed transcript
--
MGP_BALBcJ_T0049720.1-641No protein-
 
Processed transcript
--
MGP_BALBcJ_T0049718.1-418No protein-
 
Processed transcript
--
MGP_BALBcJ_T0049721.1-214No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 5,060 bps, Translation length: 901 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8CC35

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS37833, CCDS50298

Version

MGP_BALBcJ_T0049710.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.