Transcript: MGP_BALBcJ_T0049299.1

Description

steroid receptor RNA activator 1 [Source:MGI Symbol;Acc:MGI:1344414]

Gene Synonyms

AA959952, Fe65l2, Rirl2, Sra, Sra1, Srap, Straa1, Strra1, TR2S

Location

Chromosome 18: 33,889,688-33,895,509 reverse strand.

Reference strain equivalent

Sra1

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features and maps to 291 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0024248.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0049304.1	-	2061	486aa	MGP_BALBcJ_P0049304	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0049299.1	-	2360	232aa	MGP_BALBcJ_P0049299	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29156, CCDS29157	G3UZQ4 G3X8R2 Q3UR23 Q80VJ2 Q8R1C9	-
MGP_BALBcJ_T0049302.1	-	695	222aa	MGP_BALBcJ_P0049302	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0049300.1	-	871	37aa	MGP_BALBcJ_P0049300	Nonsense mediated decay		-	-
MGP_BALBcJ_T0049301.1	-	997	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0049303.1	-	337	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,360 bps, Translation length: 232 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q80VJ2, Q8R1C9

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS29156, CCDS29157

Version

MGP_BALBcJ_T0049299.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0049299.1

Summary

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Transcript: MGP_BALBcJ_T0049299.1

Summary

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