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Transcript: MGP_BALBcJ_T0049067.1

Description

UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:MGI Symbol;Acc:MGI:894693]

Gene Synonyms

ppGaNTase-T1

Location

Chromosome 18: 21,388,550-21,470,206 forward strand.

Reference strain equivalent

Galnt1

About this transcript

This transcript has 13 exons, is annotated with 16 domains and features and maps to 334 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0024164.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0049068.1-4119559aaMGP_BALBcJ_P0049068
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0049067.1-3988559aaMGP_BALBcJ_P0049067
 
Protein coding
CCDS29100E9PVK6 E9Q0U0 F6PYE1
O08912 		-
MGP_BALBcJ_T0049070.1-3807559aaMGP_BALBcJ_P0049070
 
Protein coding
--
MGP_BALBcJ_T0049069.1-980142aaMGP_BALBcJ_P0049069
 
Protein coding
--
MGP_BALBcJ_T0049072.1-72077aaMGP_BALBcJ_P0049072
 
Nonsense mediated decay
--
MGP_BALBcJ_T0049071.1-67862aaMGP_BALBcJ_P0049071
 
Nonsense mediated decay
--
MGP_BALBcJ_T0049073.1-798No protein-
 
Processed transcript
--

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 3,988 bps, Translation length: 559 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O08912

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS29100

Version

MGP_BALBcJ_T0049067.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.