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Transcript: MGP_BALBcJ_T0047739.1

Description

runt related transcription factor 2 [Source:MGI Symbol;Acc:MGI:99829]

Gene Synonyms

AML3, Cbf, Cbfa-1, Cbfa1, LS3, Osf2, PEBP2 alpha A, PEBP2aA, Pebp2a1, Pebpa2a, SL3-3 enhancer factor 1, polyomavirus enhancer binding factor 2 (PEBP2)

Location

Chromosome 17: 44,278,769-44,522,161 reverse strand.

Reference strain equivalent

Runx2

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features and maps to 114 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0023746.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0047746.1-1791596aaMGP_BALBcJ_P0047746
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0047740.1-6463514aaMGP_BALBcJ_P0047740
 
Protein coding
--
MGP_BALBcJ_T0047741.1-5898528aaMGP_BALBcJ_P0047741
 
Protein coding
--
MGP_BALBcJ_T0047742.1-2987421aaMGP_BALBcJ_P0047742
 
Protein coding
--
MGP_BALBcJ_T0047743.1-2316528aaMGP_BALBcJ_P0047743
 
Protein coding
--
MGP_BALBcJ_T0047745.1-1607506aaMGP_BALBcJ_P0047745
 
Protein coding
--
MGP_BALBcJ_T0047744.1-1565492aaMGP_BALBcJ_P0047744
 
Protein coding
--
MGP_BALBcJ_T0047748.1-693230aaMGP_BALBcJ_P0047748
 
Protein coding
--
MGP_BALBcJ_T0047750.1-440146aaMGP_BALBcJ_P0047750
 
Protein coding
--
MGP_BALBcJ_T0047739.1-2818283aaMGP_BALBcJ_P0047739
 
Nonsense mediated decay
CCDS37624, CCDS50116, CCDS70815E0CY45 E0CZ12 E0CZC6
E9PUK7 F6TRA6 F7CN98
F7CZB5 F8WHN7 Q08775
Q1PAG7 		-
MGP_BALBcJ_T0047747.1-1479106aaMGP_BALBcJ_P0047747
 
Nonsense mediated decay
--
MGP_BALBcJ_T0047751.1-40850aaMGP_BALBcJ_P0047751
 
Nonsense mediated decay
--
MGP_BALBcJ_T0047756.1-558No protein-
 
Retained intron
--
MGP_BALBcJ_T0047749.1-1245341aaMGP_BALBcJ_P0047749
 
Unknown likely coding
--

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,818 bps, Translation length: 283 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08775

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS37624, CCDS50116, CCDS70815

Version

MGP_BALBcJ_T0047739.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.