Transcript: MGP_BALBcJ_T0046693.1

Description

Pbx/knotted 1 homeobox [Source:MGI Symbol;Acc:MGI:1201409]

Gene Synonyms

D17Wsu76e, PREP1

Location

Chromosome 17: 30,424,648-30,448,220 forward strand.

Reference strain equivalent

Pknox1

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features and maps to 185 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0023454.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0046694.1	-	4232	436aa	MGP_BALBcJ_P0046694	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0046695.1	-	4084	436aa	MGP_BALBcJ_P0046695	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0046693.1	-	2132	436aa	MGP_BALBcJ_P0046693	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS28608	O70477	-
MGP_BALBcJ_T0046696.1	-	161	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0046697.1	-	689	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0046698.1	-	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,132 bps, Translation length: 436 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O70477

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS28608

Version

MGP_BALBcJ_T0046693.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0046693.1

Summary

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Transcript: MGP_BALBcJ_T0046693.1

Summary

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