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Transcript: MGP_BALBcJ_T0045108.1

Description

intersectin 1 (SH3 domain protein 1A) [Source:MGI Symbol;Acc:MGI:1338069]

Gene Synonyms

AA517634, AA545208, AI316805, AI839402, AI848451, EHSH1, Eh domain, SH3 domain regulator of endocytosis 1, Ehsh1, Ese1, Intersectin-L, Itsn, Sh3p17

Location

Chromosome 16: 88,951,014-89,092,666 forward strand.

Reference strain equivalent

Itsn1

About this transcript

This transcript has 29 exons, is annotated with 77 domains and features and maps to 281 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0023020.1 Show transcript tableHide transcript table

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
MGP_BALBcJ_T0045111.1-74181719aaMGP_BALBcJ_P0045111
 
Protein coding
-Ensembl Canonical
MGP_BALBcJ_T0045110.1-140061714aaMGP_BALBcJ_P0045110
 
Protein coding
--
MGP_BALBcJ_T0045112.1-6097621aaMGP_BALBcJ_P0045112
 
Protein coding
--
MGP_BALBcJ_T0045109.1-53931218aaMGP_BALBcJ_P0045109
 
Protein coding
--
MGP_BALBcJ_T0045113.1-53641213aaMGP_BALBcJ_P0045113
 
Protein coding
--
MGP_BALBcJ_T0045114.1-51471142aaMGP_BALBcJ_P0045114
 
Protein coding
--
MGP_BALBcJ_T0045108.1-38981176aaMGP_BALBcJ_P0045108
 
Protein coding
CCDS37402, CCDS49913, CCDS49914D3Z6P4 E9Q0N0 E9Q3I4
E9Q3I5 E9Q3I8 E9Q3I9
F6R6C8 F6TCC6 F6U8U1
F6ZLP6 F6ZX53 Q6J1S9
Q6NZJ5 Q9Z0R4 		-
MGP_BALBcJ_T0045117.1-37871147aaMGP_BALBcJ_P0045117
 
Protein coding
--
MGP_BALBcJ_T0045118.1-1110359aaMGP_BALBcJ_P0045118
 
Protein coding
--
MGP_BALBcJ_T0045130.1-1036345aaMGP_BALBcJ_P0045130
 
Protein coding
--
MGP_BALBcJ_T0045126.1-821256aaMGP_BALBcJ_P0045126
 
Protein coding
--
MGP_BALBcJ_T0045132.1-519173aaMGP_BALBcJ_P0045132
 
Protein coding
--
MGP_BALBcJ_T0045125.1-99177aaMGP_BALBcJ_P0045125
 
Nonsense mediated decay
--
MGP_BALBcJ_T0045131.1-42265aaMGP_BALBcJ_P0045131
 
Nonsense mediated decay
--
MGP_BALBcJ_T0045127.1-28272aaMGP_BALBcJ_P0045127
 
Nonsense mediated decay
--
MGP_BALBcJ_T0045133.1-1055No protein-
 
Processed transcript
--
MGP_BALBcJ_T0045122.1-723No protein-
 
Processed transcript
--
MGP_BALBcJ_T0045129.1-568No protein-
 
Processed transcript
--
MGP_BALBcJ_T0045119.1-481No protein-
 
Processed transcript
--
MGP_BALBcJ_T0045120.1-442No protein-
 
Processed transcript
--
MGP_BALBcJ_T0045128.1-2829No protein-
 
Retained intron
--
MGP_BALBcJ_T0045124.1-777No protein-
 
Retained intron
--
MGP_BALBcJ_T0045123.1-492No protein-
 
Retained intron
--
MGP_BALBcJ_T0045116.1-488No protein-
 
Retained intron
--
MGP_BALBcJ_T0045121.1-355No protein-
 
Retained intron
--
MGP_BALBcJ_T0045115.1-352No protein-
 
Retained intron
--

Summary

Statistics

Exons: 29, Coding exons: 27, Transcript length: 3,898 bps, Translation length: 1,176 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Z0R4

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS37402, CCDS49913, CCDS49914

Version

MGP_BALBcJ_T0045108.1

Type

Protein coding

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.