Transcript: MGP_BALBcJ_T0042748.1

Description

TARBP2, RISC loading complex RNA binding subunit [Source:MGI Symbol;Acc:MGI:103027]

Gene Synonyms

Prbp, TRBP

Location

Chromosome 15: 100,638,315-100,644,215 forward strand.

Reference strain equivalent

Tarbp2

About this transcript

This transcript has 8 exons, is annotated with 8 domains and features and maps to 274 oligo probes.

Gene

This transcript is a product of gene MGP_BALBcJ_G0022384.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
MGP_BALBcJ_T0042753.1	-	1523	365aa	MGP_BALBcJ_P0042753	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_BALBcJ_T0042750.1	-	1278	274aa	MGP_BALBcJ_P0042750	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042758.1	-	1081	225aa	MGP_BALBcJ_P0042758	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042760.1	-	782	243aa	MGP_BALBcJ_P0042760	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042755.1	-	420	56aa	MGP_BALBcJ_P0042755	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042752.1	-	370	49aa	MGP_BALBcJ_P0042752	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-
MGP_BALBcJ_T0042748.1	-	1819	79aa	MGP_BALBcJ_P0042748	Nonsense mediated decay	CCDS27886, CCDS57013	D3YUS9 D3YZS5 D3Z033 D3Z282 D6RCY4 D6RE49 P97473 Q3UNH9	-
MGP_BALBcJ_T0042759.1	-	482	58aa	MGP_BALBcJ_P0042759	Nonsense mediated decay		-	-
MGP_BALBcJ_T0042756.1	-	951	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-
MGP_BALBcJ_T0042751.1	-	2732	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0042749.1	-	1033	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0042757.1	-	713	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0042761.1	-	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
MGP_BALBcJ_T0042754.1	-	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-

Summary

Statistics

Exons: 8, Coding exons: 3, Transcript length: 1,819 bps, Translation length: 79 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P97473

CCDS

This transcript is a member of the Mouse BALB/cJ CCDS set: CCDS27886, CCDS57013

Version

MGP_BALBcJ_T0042748.1

Type

Nonsense mediated decay

Annotation Method

Mouse strain gene models, generated by the Mouse Genomes Project, built from a combination of annotation mapping from the reference mouse (GRCm38) and strain-specific RNA-seq data.

Transcript: MGP_BALBcJ_T0042748.1

Summary

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Transcript: MGP_BALBcJ_T0042748.1

Summary

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